1. CTCFBSDB_all_exp_sites_Sept12_2012.txt.gz
All the experimentally identified CTCF binding sites in CTCFBSDB 2.0.
The column labels are described in the Help section of the website.

2. allcomp.txt.gz
All the predicted CTCF binding sites in CTCFBSDB 2.0.
The column labels are described in the Help section of the website.

File in the CTCFBSDB1.0 folder:
1. allexp.txt.gz
All the experimentally identified CTCF binding sites from old version of CTCFBSDB database.